BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026H12SP1|AL428637
(830 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1349 1456 0.0
>3x_Contig1349
Length = 5890
Score = 1456 bits (717), Expect = 0.0
Identities = 790/831 (95%), Gaps = 2/831 (0%)
Strand = Plus / Plus
Query: 1 atcacatcccaacgataatcgctggtgatgatttatacggtggtactcaacgtttattaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4390 atcacatcccaacgataatcgctggtgatgatttatacggtggtactcaacgtttattaa 4449
Query: 61 cgttcctacagacgagaaaccatgctaaagtgattcacacagatactacggatgccgagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4450 cgttcctacagacgagaaaccatgctaaagtgattcacacagatactacggatgccgagt 4509
Query: 121 cgttcatcaaattgtwcaattytttggggcaagttgatatcgtgcttttwgaatctccaa 180
||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 4510 cgttcatcaaattgtacaattctttggggcaagttgatatcgtgcttttagaatctccaa 4569
Query: 181 ccaacccgttgatgaaagtygccgatttaccaaggctgtgccaatttktkaaacaaaaag 240
||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||
Sbjct: 4570 ccaacccgttgatgaaagtcgccgatttaccaaggctgtgccaatttgtgaaacaaaaag 4629
Query: 241 gtggttcaagttccaactgttaaatygtcgttgatwacaccatgatgtyaggtttgawtt 300
|||||||||||||||||||| |||| ||||||||| |||||||||||| |||||||| ||
Sbjct: 4630 gtggttcaagttccaactgtaaaatcgtcgttgataacaccatgatgtcaggtttgaatt 4689
Query: 301 ccaaccctttgcwattyggagcagatgttgtatacgawtccggtacgawatacctcaatk 360
|||||||||||| ||| ||||||||||| |||||||| |||||||||| ||||||||||
Sbjct: 4690 ccaaccctttgcaattcggagcagatgtagtatacgaatccggtacgaaatacctcaatg 4749
Query: 361 gacaccacgatatcatggctggtgttatwatwgccaagawggacgtggctccatccgttt 420
||||||||||||||||||||||||| || || ||||||| |||||||||||||||||| |
Sbjct: 4750 gacaccacgatatcatggctggtgtaataatagccaagaaggacgtggctccatccgtat 4809
Query: 421 wttttgtyatttacagttccggtgccggtctatctccgatggattcatggctctttatcc 480
||| || ||| ||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 4810 atttcgtcattaacagtaccggtgccggtctatctccgatggattcatggctcttgatcc 4869
Query: 481 gtggtctcawgaccttatctgttcgtctttwcaaacaacagataaacgcaatggtgctct 540
||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 4870 gtggtctcaagaccttatctgttcgtctttacaaacaacagataaacgcaatggtgctct 4929
Query: 541 cgcactggctacaagatatatkcggattcaagcctacagataataaccagcaactaaaga 600
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 4930 cgcactggctacaagatatatgcggattcaagcctacagataataaccagcaactaaaga 4989
Query: 601 caaggtttgttgggttggaatctcaccctcagttcgaattgcataawagtttcaacaatg 660
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 4990 caaggtttgttgggttggaatctcaccctcagttcgaattgcataaaagtttcaacaatg 5049
Query: 661 gtcccggtgcagtgctatccattgagactggcgacctagcactaagcgaascatttgtwa 720
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |
Sbjct: 5050 gtcccggtgcagtgctatccattgagactggcgacctagcactaagcgaagccattgtaa 5109
Query: 721 cttctaawagactaaatatwtkgggccgtcacggtatcgtttggatgtgtc-actcgttg 779
||||||| ||||||||||| | ||||||||||||||||||||||||||||| ||||||||
Sbjct: 5110 cttctaaaagactaaatatat-gggccgtcacggtatcgtttggatgtgtcaactcgttg 5168
Query: 780 atctccatgccatgcaagatgtcacatgcctccatcgatycagaactacgg 830
||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 5169 atctccatgccatgcaagatgtcacatgcctccatcgatccagaactacgg 5219
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.33
Gapped
Lambda K H
1.41 0.716 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2792
Number of Sequences: 1807
Number of extensions: 2792
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 830
length of database: 10,358,551
effective HSP length: 16
effective length of query: 814
effective length of database: 10,329,639
effective search space: 8408326146
effective search space used: 8408326146
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.4 bits)
S1: 12 (24.9 bits)
S2: 49 (100.0 bits)